Similar HOG based on pairwise relations to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E1028320.1b.1b.1a with 2 members (nicotinamide phosphoribosyltransferase)

LUCA / Eukaryota / Sar / Alveolata / Suessiales

Completeness score: 1.00

‹

This HOG has 58 similar HOGs:

Loading, please wait...

Rank	HOG ID	Shared orthologs	HOG size	Description
1	HOG:E1028320	159	451	nicotinamide phosphoribosyltransferase
2	HOG:E1028320.1b.4b.4a.1a.1b.5a.1c	63	67	nicotinamide phosphoribosyltransferase
3	HOG:E1028320.1b.4b.4b	55	36	nicotinamide phosphoribosyltransferase
4	HOG:E1028320.1b.4b.4a.1a.1b.5a	49	117	nicotinamide phosphoribosyltransferase
5	HOG:E1028320.1b.4b.4a.1a.1b	44	170	nicotinamide phosphoribosyltransferase
6	HOG:E1028320.1b.4b	42	280	nicotinamide phosphoribosyltransferase
7	HOG:E1028320.1b.4b.2a	25	16	nicotinamide phosphoribosyltransferase
8	HOG:E1028320.1b	20	318	nicotinamide phosphoribosyltransferase
9	HOG:E1028320.2a	9	6	nicotinamide phosphoribosyltransferase
10	HOG:E1028320.2b	6	6	nicotinamide phosphoribosyltransferase
11	HOG:E1028320.1b.4b.4a	6	190	nicotinamide phosphoribosyltransferase
12	HOG:E1028320.1b.4b.4a.1a.1b.2a	3	2	nicotinamide phosphoribosyltransferase
13	HOG:E1028320.1b.4b.4a.1a	3	178	nicotinamide phosphoribosyltransferase
14	HOG:E1028320.4b	2	1	nicotinamide phosphoribosyltransferase
15	HOG:E1028320.4a	2	1	nicotinamide phosphoribosyltransferase
16	HOG:E1028320.1b.5a	2	1	nicotinamide phosphoribosyltransferase
17	HOG:E1028320.1b.4c	2	1	nicotinamide phosphoribosyltransferase
18	HOG:E1028320.1b.4b.5b	2	1	nicotinamide phosphoribosyltransferase
19	HOG:E1028320.1b.4b.5a	2	1	nicotinamide phosphoribosyltransferase
20	HOG:E1028320.1b.4b.4b.3a	2	1	nicotinamide phosphoribosyltransferase
21	HOG:E1028320.1b.4b.4b.2b	2	1	nicotinamide phosphoribosyltransferase
22	HOG:E1028320.1b.4b.4a.1c.3c	2	1	nicotinamide phosphoribosyltransferase
23	HOG:E1028320.1b.4b.4a.1c.3b	2	1	nicotinamide phosphoribosyltransferase
24	HOG:E1028320.1b.4b.4a.1c.3a	2	1	nicotinamide phosphoribosyltransferase
25	HOG:E1028320.1b.4b.4a.1a.1b.5a.1a	2	2	nicotinamide phosphoribosyltransferase

Showing 1 to 25 of 58 rows rows per page